Genome Meta Information: Janibacter indicus TT2 (GCA_014883915.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014883915.1 | ||
| HOMD Taxon-ID | HMT-0339 | ||
| Species Name (in use by HOMD) | Janibacter indicus | ||
| Organism Name (as deposited) | HMT-339 Janibacter indicus TT2 | ||
| Strain or Isolate | TT2 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Dermatophilaceae;g__Janibacter; s__Janibacter indicus |
||
| Sequencing Technology | PacBio RSII | ||
| Genome Coverage | 169 | ||
| Contigs |
|
||
| Total Sequence Length | 3,663,756 (bp) | ||
| GC Percentage | 71.02 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/883/915/GCA_014883915.1_ASM1488391v1 | ||
| CDS | 3559 | ||
| Genes | 3643 | ||
| mRNA | 3643 | ||
| misc RNA | 23 | ||
| rRNA | 6 | ||
| tRNA | 54 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.35 % | ||
| CheckM Completeness | 94.65 % | ||
| CheckM Contamination | 7.84 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1488391v1 |
| GenBank Assembly Accession | GCA_014883915.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014883915.1 [NCBI] |
| BioSample | SAMN16268743 [NCBI] |
| BioProject | PRJNA665797 [NCBI] |
| Submitter | Changwon National University |
| Submission Date | 2020-09-26T06:01:04.910 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 857417 |
| Isolation Source | skin swab |
| Geo Location | South Korea: Changwon |
