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Genome Meta Information:
Rothia mucilaginosa CECT30002 (GCA_014894895.1)
| HOMD Genome-ID | GCA_014894895.1 |
| HOMD Taxon-ID | HMT-681 |
| Species Name (in use by HOMD) | Rothia mucilaginosa |
| Organism Name (as deposited) | HMT-681 Rothia mucilaginosa clade-681 CECT30002 |
| Strain or Isolate | CECT30002 |
| GTDB Taxonomy | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia;
s__Rothia mucilaginosa |
| Sequencing Technology | Illumina MiSeq; Oxford Nanopore MinION |
| Genome Coverage | 390.0x |
| Contigs |
|
| Total Sequence Length | 2,351,715 (bp) |
| GC Percentage | 59.31 |
| MAG | |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/894/895/GCA_014894895.1_ASM1489489v1 |
| CDS | 2390 |
| Genes | 2465 |
| mRNA | 2465 |
| misc RNA | 13 |
| rRNA | 10 |
| tRNA | 51 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
Rothia__mucilaginosa__HMT_147_681
Open SVG
|
|
| Genome Assembly Name | ASM1489489v1 |
| GenBank Assembly Accession |
GCA_014894895.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_014894895.1
[NCBI]
|
| BioSample |
SAMN15866156
[NCBI]
|
| BioProject |
PRJNA658327
[NCBI]
|
| Submitter | FISABIO |
| Submission Date | 2020-08-20T12:17:03.960 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | live |
| WGS Project | JACVMJ01 |
| NCBI TaxID | 43675 |
| Isolation Source | |
| Geo Location | Spain: Valencia |
| ANI (Average Nucluotide Identity) | 94.38 % |
| CheckM Completeness | 71.05 % |
| CheckM Percentile | 1.6666666 % |
| CheckM Contamination | 1.95 % |
|
