Genome Meta Information: Staphylococcus haemolyticus HESMS017 (GCA_015070685.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_015070685.1 | ||
| HOMD Taxon-ID | HMT-0120 | ||
| Species Name (in use by HOMD) | Staphylococcus haemolyticus | ||
| Organism Name (as deposited) | HMT-120 Staphylococcus haemolyticus HESMS017 | ||
| Strain or Isolate | HESMS017 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus haemolyticus |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,462,495 (bp) | ||
| GC Percentage | 32.78 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/070/685/GCA_015070685.1_ASM1507068v1 | ||
| CDS | 2382 | ||
| Genes | 2519 | ||
| mRNA | 2519 | ||
| misc RNA | 74 | ||
| rRNA | 5 | ||
| tRNA | 57 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.5 % | ||
| CheckM Completeness | 99.16 % | ||
| CheckM Contamination | 1.38 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1507068v1 |
| GenBank Assembly Accession | GCA_015070685.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_015070685.1 [NCBI] |
| BioSample | SAMN16402344 [NCBI] |
| BioProject | PRJNA668279 [NCBI] |
| Submitter | University of Luebeck |
| Submission Date | 2020-10-09T07:59:07.766 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JADCSD01 |
| NCBI TaxID | 1283 |
| Isolation Source | nasal mucosa |
| Geo Location | Ghana |
