Genome Meta Information: Anaerovoracaceae [G1] sulci JCVI_28_bin.13 (GCA_015255865.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_015255865.1 | ||
| HOMD Taxon-ID | HMT-467 | ||
| Species Name (in use by HOMD) | Anaerovoracaceae [G1] sulci | ||
| Organism Name (as deposited) | HMT-467 Peptostreptococcaceae [G1 "Eubacterium"] sulci JCVI_28_bin.13 | ||
| Strain or Isolate | JCVI_28_bin.13 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__Eubacterium_B; s__Eubacterium_B sulci |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 3.5x | ||
| Contigs |
|
||
| Total Sequence Length | 1,672,967 (bp) | ||
| GC Percentage | 40.23 | ||
| MAG | yes | ||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/255/865/GCA_015255865.1_ASM1525586v1 | ||
| CDS | 1537 | ||
| Genes | 1597 | ||
| mRNA | 1597 | ||
| misc RNA | 26 | ||
| rRNA | 0 | ||
| tRNA | 33 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.44 % | ||
| CheckM Contamination | 0.71 % | ||
| CheckM2 Completeness | 94.59 % | ||
| CheckM2 Contamination | 0.25 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1525586v1 |
| GenBank Assembly Accession | GCA_015255865.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMN14570751 [NCBI] |
| BioProject | PRJNA624185 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2020-04-09T20:00:08.993 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JABZNE01 |
| NCBI TaxID | 143393 |
| Isolation Source | saliva |
| Geo Location | USA: UCLA School of Dentistry |
