Taxon Table | Genome Table
Genome Meta Information:
Hoylesella
nanceiensis
JCVI_44_bin.6 (GCA_015262135.1)
| HOMD Genome-ID |
GCA_015262135.1
|
| HOMD Taxon-ID |
HMT-0299
|
| Species Name (in use by HOMD) |
Hoylesella nanceiensis
|
| Organism Name (as deposited) |
HMT-299 Hoylesella nanceiensis JCVI_44_bin.6
|
| Strain or Isolate |
JCVI_44_bin.6
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella;
s__Prevotella nanceiensis |
| Sequencing Technology |
Illumina NextSeq
|
| Genome Coverage |
4.60427
|
| Contigs |
Number of Contigs: 239
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,302,548 (bp) |
| GC Percentage |
38.38
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/262/135/GCA_015262135.1_ASM1526213v1
|
| CDS |
1707
|
| Genes |
1746
|
| mRNA |
1746
|
| misc RNA |
6
|
| rRNA |
0
|
| tRNA |
32
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
97.01 %
|
| CheckM Completeness |
91.34 %
|
| CheckM Contamination |
1.35 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM1526213v1
|
| GenBank Assembly Accession |
GCA_015262135.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_015262135.1
[NCBI]
|
| BioSample |
SAMN14570915
[NCBI]
|
| BioProject |
PRJNA624185
[NCBI]
|
| Submitter |
J. Craig Venter Institute
|
| Submission Date |
2020-04-09T20:41:07.730
|
| Assembly Method |
|
| Assembly Level |
Scaffold
|
| Sequencing Status |
|
| WGS
Project |
JABZTI01
|
| NCBI TaxID |
425941
|
| Isolation Source |
saliva
|
| Geo Location |
USA: UCLA School of Dentistry
|
