Genome Meta Information: Stutzerimonas stutzeri ATCC 14405 (GCA_015291885.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_015291885.1 | ||
| HOMD Taxon-ID | HMT-0477 | ||
| Species Name (in use by HOMD) | Stutzerimonas stutzeri | ||
| Organism Name (as deposited) | HMT-477 Stutzerimonas stutzeri ATCC 14405 | ||
| Strain or Isolate | ATCC 14405 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Stutzerimonas; s__Stutzerimonas stutzeri_AC |
||
| Sequencing Technology | PacBio RS; Illumina MiSeq | ||
| Genome Coverage | 78 | ||
| Contigs |
|
||
| Total Sequence Length | 4,639,098 (bp) | ||
| GC Percentage | 61.31 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/291/885/GCA_015291885.1_ASM1529188v1 | ||
| CDS | 4262 | ||
| Genes | 4394 | ||
| mRNA | 4394 | ||
| misc RNA | 57 | ||
| rRNA | 12 | ||
| tRNA | 62 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 86.91 % | ||
| CheckM Completeness | 99.81 % | ||
| CheckM Contamination | 0.14 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1529188v1 |
| GenBank Assembly Accession | GCA_015291885.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_015291885.1 [NCBI] |
| BioSample | SAMN10961665 [NCBI] |
| BioProject | PRJNA522963 [NCBI] |
| Submitter | Max Planck Institute for Biophysik |
| Submission Date | 2019-02-18T07:38:05.226 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 316 |
| Isolation Source | marine sediments |
| Geo Location | missing |
