Genome Meta Information: Staphylococcus schleiferi ssch3 (GCA_015326545.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_015326545.1 | ||
| HOMD Taxon-ID | HMT-0233 | ||
| Species Name (in use by HOMD) | Staphylococcus schleiferi | ||
| Organism Name (as deposited) | HMT-233 Staphylococcus schleiferi ssch3 | ||
| Strain or Isolate | ssch3 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus schleiferi |
||
| Sequencing Technology | Oxford Nanopore; Illumina | ||
| Genome Coverage | 980 | ||
| Contigs |
|
||
| Total Sequence Length | 2,508,018 (bp) | ||
| GC Percentage | 36.03 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/326/545/GCA_015326545.1_ASM1532654v1 | ||
| CDS | 2302 | ||
| Genes | 2498 | ||
| mRNA | 2498 | ||
| misc RNA | 114 | ||
| rRNA | 22 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 85.23 % | ||
| CheckM Completeness | 98.94 % | ||
| CheckM Contamination | 1.21 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1532654v1 |
| GenBank Assembly Accession | GCA_015326545.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_015326545.1 [NCBI] |
| BioSample | SAMN16632878 [NCBI] |
| BioProject | PRJNA674010 [NCBI] |
| Submitter | University of Siena |
| Submission Date | 2020-11-03T06:21:04.560 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 150056 |
| Isolation Source | |
| Geo Location | Italy:Milano,Istituto Ortopedi |
