Genome Meta Information: Streptococcus anginosus HF-2466 (GCA_015594645.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_015594645.1 | ||
| HOMD Taxon-ID | HMT-0543 | ||
| Species Name (in use by HOMD) | Streptococcus anginosus | ||
| Organism Name (as deposited) | HMT-543 Streptococcus anginosus HF-2466 | ||
| Strain or Isolate | HF-2466 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus anginosus |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 1,975,024 (bp) | ||
| GC Percentage | 38.98 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/594/645/GCA_015594645.1_ASM1559464v1 | ||
| CDS | 1952 | ||
| Genes | 2041 | ||
| mRNA | 2041 | ||
| misc RNA | 41 | ||
| rRNA | 5 | ||
| tRNA | 42 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.65 % | ||
| CheckM Contamination | 0.77 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1559464v1 |
| GenBank Assembly Accession | GCA_015594645.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_015594645.1 [NCBI] |
| BioSample | SAMN16685995 [NCBI] |
| BioProject | PRJNA674967 [NCBI] |
| Submitter | Chinese Center for Disease Control and Prevention |
| Submission Date | 2020-11-06T03:17:05.500 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JADNQU01 |
| NCBI TaxID | 2785792 |
| Isolation Source | stool |
| Geo Location | China: Qinghai |
