Genome Meta Information: Enterococcus durans KCTC 13289 (GCA_015999505.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_015999505.1 | ||
| HOMD Taxon-ID | HMT-0880 | ||
| Species Name (in use by HOMD) | Enterococcus durans | ||
| Organism Name (as deposited) | HMT-880 Enterococcus durans KCTC 13289 | ||
| Strain or Isolate | KCTC 13289 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_B; s__Enterococcus_B durans |
||
| Sequencing Technology | PacBio RSII; Illumina MiSeq | ||
| Genome Coverage | 229 | ||
| Contigs |
|
||
| Total Sequence Length | 3,137,200 (bp) | ||
| GC Percentage | 37.9 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/999/505/GCA_015999505.1_ASM1599950v1 | ||
| CDS | 3004 | ||
| Genes | 3162 | ||
| mRNA | 3162 | ||
| misc RNA | 68 | ||
| rRNA | 18 | ||
| tRNA | 71 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.01 % | ||
| CheckM Contamination | 0.24 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1599950v1 |
| GenBank Assembly Accession | GCA_015999505.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_015999505.1 [NCBI] |
| BioSample | SAMN16925173 [NCBI] |
| BioProject | PRJNA680827 [NCBI] |
| Submitter | Ildong Pharmaceutical |
| Submission Date | 2020-11-25T21:44:05.081 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 53345 |
| Isolation Source | Dried milk |
| Geo Location | - |
