Genome Meta Information: Fannyhessea vaginae FDAARGOS_934 (GCA_016026575.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_016026575.1 | ||
| HOMD Taxon-ID | HMT-0814 | ||
| Species Name (in use by HOMD) | Fannyhessea vaginae | ||
| Organism Name (as deposited) | HMT-814 Fannyhessea vaginae FDAARGOS_934 | ||
| Strain or Isolate | FDAARGOS_934 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Fannyhessea; s__Fannyhessea vaginae |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 1552 | ||
| Contigs |
|
||
| Total Sequence Length | 1,447,017 (bp) | ||
| GC Percentage | 42.71 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/026/575/GCA_016026575.1_ASM1602657v1 | ||
| CDS | 1162 | ||
| Genes | 1222 | ||
| mRNA | 1222 | ||
| misc RNA | 8 | ||
| rRNA | 6 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.02 % | ||
| CheckM Contamination | 0.12 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1602657v1 |
| GenBank Assembly Accession | GCA_016026575.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_016026575.1 [NCBI] |
| BioSample | SAMN13450464 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2019-12-02T16:17:07.413 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 82135 |
| Isolation Source | missing |
| Geo Location | Not applicable |
