Genome Meta Information: Aggregatibacter segnis FDAARGOS_987 (GCA_016127115.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_016127115.1 | ||
| HOMD Taxon-ID | HMT-762 | ||
| Species Name (in use by HOMD) | Aggregatibacter segnis | ||
| Organism Name (as deposited) | HMT-762 Aggregatibacter segnis FDAARGOS_987 | ||
| Strain or Isolate | FDAARGOS_987 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Aggregatibacter; s__Aggregatibacter segnis |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 2740.8x | ||
| Contigs |
|
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| Total Sequence Length | 2,062,506 (bp) | ||
| GC Percentage | 42.55 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/127/115/GCA_016127115.1_ASM1612711v1 | ||
| CDS | 1948 | ||
| Genes | 2064 | ||
| mRNA | 2064 | ||
| misc RNA | 37 | ||
| rRNA | 19 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.89 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1612711v1 |
| GenBank Assembly Accession | GCA_016127115.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_016127115.1 [NCBI] |
| BioSample | SAMN16357156 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2020-10-03T14:56:08.366 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 739 |
| Isolation Source | missing |
| Geo Location | Germany: Braunschweig |
