Genome Meta Information: Enterococcus casseliflavus FDAARGOS_998 (GCA_016127635.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_016127635.1 | ||
| HOMD Taxon-ID | HMT-0801 | ||
| Species Name (in use by HOMD) | Enterococcus casseliflavus | ||
| Organism Name (as deposited) | HMT-801 Enterococcus casseliflavus FDAARGOS_998 | ||
| Strain or Isolate | FDAARGOS_998 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_D; s__Enterococcus_D casseliflavus |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 1258.45 | ||
| Contigs |
|
||
| Total Sequence Length | 3,580,828 (bp) | ||
| GC Percentage | 42.44 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/127/635/GCA_016127635.1_ASM1612763v1 | ||
| CDS | 3469 | ||
| Genes | 3606 | ||
| mRNA | 3606 | ||
| misc RNA | 58 | ||
| rRNA | 15 | ||
| tRNA | 63 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.35 % | ||
| CheckM Completeness | 96.26 % | ||
| CheckM Contamination | 7.05 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1612763v1 |
| GenBank Assembly Accession | GCA_016127635.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_016127635.1 [NCBI] |
| BioSample | SAMN16357167 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2020-10-03T14:56:08.566 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 37734 |
| Isolation Source | missing |
| Geo Location | Germany: Braunschweig |
