Genome Meta Information: Actinomyces oris FDAARGOS_1051 (GCA_016127955.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_016127955.1 | ||
| HOMD Taxon-ID | HMT-893 | ||
| Species Name (in use by HOMD) | Actinomyces oris | ||
| Organism Name (as deposited) | HMT-893 Actinomyces oris clade-893 FDAARGOS_1051 | ||
| Strain or Isolate | FDAARGOS_1051 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces; s__Actinomyces oris |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 859.6x | ||
| Contigs |
|
||
| Total Sequence Length | 3,190,396 (bp) | ||
| GC Percentage | 68.47 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/127/955/GCA_016127955.1_ASM1612795v1 | ||
| CDS | 2603 | ||
| Genes | 2680 | ||
| mRNA | 2680 | ||
| misc RNA | 14 | ||
| rRNA | 11 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0.47 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.04 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1612795v1 |
| GenBank Assembly Accession | GCA_016127955.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_016127955.1 [NCBI] |
| BioSample | SAMN16357220 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2020-10-03T14:56:09.620 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 544580 |
| Isolation Source | missing |
| Geo Location | Germany: Braunschweig |
