Genome Meta Information: Jeotgalicoccus marinus ATCC 8456 (GCA_016313225.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_016313225.1 | ||
| HOMD Taxon-ID | HMT-0243 | ||
| Species Name (in use by HOMD) | Jeotgalicoccus marinus | ||
| Organism Name (as deposited) | HMT-243 Jeotgalicoccus marinus ATCC 8456 | ||
| Strain or Isolate | ATCC 8456 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Salinicoccaceae;g__Jeotgalicoccus; s__Jeotgalicoccus marinus |
||
| Sequencing Technology | PacBio RS | ||
| Genome Coverage | 110 | ||
| Contigs |
|
||
| Total Sequence Length | 2,090,457 (bp) | ||
| GC Percentage | 36.92 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/313/225/GCA_016313225.1_ASM1631322v1 | ||
| CDS | 2148 | ||
| Genes | 2241 | ||
| mRNA | 2241 | ||
| misc RNA | 28 | ||
| rRNA | 12 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 91.1 % | ||
| CheckM Contamination | 3.05 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1631322v1 |
| GenBank Assembly Accession | GCA_016313225.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_016313225.1 [NCBI] |
| BioSample | SAMN17088962 [NCBI] |
| BioProject | PRJNA685651 [NCBI] |
| Submitter | Graz University of Technology |
| Submission Date | 2020-12-16T09:26:04.567 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 946435 |
| Isolation Source | not applicable |
| Geo Location | not applicable |
