Genome Meta Information: Corynebacterium tuberculostearicum CIP 102622 (GCA_016613425.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_016613425.1 | ||
| HOMD Taxon-ID | HMT-0077 | ||
| Species Name (in use by HOMD) | Corynebacterium tuberculostearicum | ||
| Organism Name (as deposited) | HMT-077 Corynebacterium tuberculostearicum CIP 102622 | ||
| Strain or Isolate | CIP 102622 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium tuberculostearicum |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 225 | ||
| Contigs |
|
||
| Total Sequence Length | 2,488,912 (bp) | ||
| GC Percentage | 59.79 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/613/425/GCA_016613425.1_ASM1661342v1 | ||
| CDS | 2302 | ||
| Genes | 2364 | ||
| mRNA | 2364 | ||
| misc RNA | 9 | ||
| rRNA | 3 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.48 % | ||
| CheckM Completeness | 99.49 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1661342v1 |
| GenBank Assembly Accession | GCA_016613425.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_016613425.1 [NCBI] |
| BioSample | SAMN17079549 [NCBI] |
| BioProject | PRJNA685200 [NCBI] |
| Submitter | LMSM Lab ; Rouen University |
| Submission Date | 2020-12-14T16:45:04.436 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAEHFL01 |
| NCBI TaxID | 38304 |
| Isolation Source | |
| Geo Location | France:Paris |
