Genome Meta Information: Campylobacter ureolyticus FDAARGOS_1102 (GCA_016766895.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_016766895.1 | ||
| HOMD Taxon-ID | HMT-0842 | ||
| Species Name (in use by HOMD) | Campylobacter ureolyticus | ||
| Organism Name (as deposited) | HMT-842 Campylobacter ureolyticus FDAARGOS_1102 | ||
| Strain or Isolate | FDAARGOS_1102 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter_B; s__Campylobacter_B ureolyticus |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 3676.13 | ||
| Contigs |
|
||
| Total Sequence Length | 1,826,798 (bp) | ||
| GC Percentage | 29.07 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/766/895/GCA_016766895.1_ASM1676689v1 | ||
| CDS | 1801 | ||
| Genes | 1863 | ||
| mRNA | 1863 | ||
| misc RNA | 6 | ||
| rRNA | 8 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 97.99 % | ||
| CheckM Contamination | 0.95 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1676689v1 |
| GenBank Assembly Accession | GCA_016766895.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_016766895.1 [NCBI] |
| BioSample | SAMN16357271 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2020-10-03T14:56:10.680 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 827 |
| Isolation Source | missing |
| Geo Location | Germany: Braunschweig |
