Genome Meta Information: Staphylococcus pasteuri FDAARGOS_1206 (GCA_016888605.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_016888605.1 | ||
| HOMD Taxon-ID | HMT-0141 | ||
| Species Name (in use by HOMD) | Staphylococcus pasteuri | ||
| Organism Name (as deposited) | HMT-141 Staphylococcus pasteuri FDAARGOS_1206 | ||
| Strain or Isolate | FDAARGOS_1206 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus pasteuri |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 1320.16 | ||
| Contigs |
|
||
| Total Sequence Length | 2,687,438 (bp) | ||
| GC Percentage | 31.63 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/888/605/GCA_016888605.1_ASM1688860v1 | ||
| CDS | 2583 | ||
| Genes | 2731 | ||
| mRNA | 2731 | ||
| misc RNA | 66 | ||
| rRNA | 20 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.07 % | ||
| CheckM Completeness | 99.21 % | ||
| CheckM Contamination | 1.77 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1688860v1 |
| GenBank Assembly Accession | GCA_016888605.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_016888605.1 [NCBI] |
| BioSample | SAMN16357348 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2020-10-03T14:56:12.250 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAFEKM01 |
| NCBI TaxID | 45972 |
| Isolation Source | DSMZ Isolate |
| Geo Location | Germany: Braunschweig |
