Genome Meta Information: Kocuria palustris F6_7S_B_1 (GCA_017167265.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_017167265.1 | ||
| HOMD Taxon-ID | HMT-0084 | ||
| Species Name (in use by HOMD) | Kocuria palustris | ||
| Organism Name (as deposited) | HMT-084 Kocuria palustris F6_7S_B_1 | ||
| Strain or Isolate | F6_7S_B_1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Kocuria; s__Kocuria palustris |
||
| Sequencing Technology | Illumina NovaSeq | ||
| Genome Coverage | 595.655 | ||
| Contigs |
|
||
| Total Sequence Length | 2,843,704 (bp) | ||
| GC Percentage | 70.54 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/017/167/265/GCA_017167265.1_ASM1716726v1 | ||
| CDS | 2500 | ||
| Genes | 2578 | ||
| mRNA | 2578 | ||
| misc RNA | 24 | ||
| rRNA | 4 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.35 % | ||
| CheckM Completeness | 98.56 % | ||
| CheckM Contamination | 0.84 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1716726v1 |
| GenBank Assembly Accession | GCA_017167265.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_017167265.1 [NCBI] |
| BioSample | SAMN17570249 [NCBI] |
| BioProject | PRJNA690512 [NCBI] |
| Submitter | Jet Propulsion Laboratory, California Institute of Technology |
| Submission Date | 2021-01-25T17:32:05.483 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JAFDQD01 |
| NCBI TaxID | 71999 |
| Isolation Source | International Space Station during MT-2 |
| Geo Location | USA: International Space Stati |
