Genome Meta Information: Campylobacter curvus 2017609248 (GCA_017170235.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_017170235.1 | ||
| HOMD Taxon-ID | HMT-0580 | ||
| Species Name (in use by HOMD) | Campylobacter curvus | ||
| Organism Name (as deposited) | HMT-580 Campylobacter curvus 2017609248 | ||
| Strain or Isolate | 2017609248 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter_A; s__Campylobacter_A curvus |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,028,928 (bp) | ||
| GC Percentage | 44.28 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/017/170/235/GCA_017170235.1_ASM1717023v1 | ||
| CDS | 2025 | ||
| Genes | 2072 | ||
| mRNA | 2072 | ||
| misc RNA | 4 | ||
| rRNA | 2 | ||
| tRNA | 40 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.76 % | ||
| CheckM Completeness | 92.54 % | ||
| CheckM Contamination | 1.74 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1717023v1 |
| GenBank Assembly Accession | GCA_017170235.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_017170235.1 [NCBI] |
| BioSample | SAMN16789033 [NCBI] |
| BioProject | PRJNA678133 [NCBI] |
| Submitter | SA Pathology |
| Submission Date | 2020-11-13T01:57:07.500 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JADZGJ01 |
| NCBI TaxID | 200 |
| Isolation Source | unknown |
| Geo Location | Australia: South Australia |
