Genome Meta Information: Enterococcus faecalis L13 (GCA_017280035.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_017280035.1 | ||
| HOMD Taxon-ID | HMT-0604 | ||
| Species Name (in use by HOMD) | Enterococcus faecalis | ||
| Organism Name (as deposited) | HMT-604 Enterococcus faecalis L13 | ||
| Strain or Isolate | L13 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus; s__Enterococcus faecalis |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 247 | ||
| Contigs |
|
||
| Total Sequence Length | 2,846,366 (bp) | ||
| GC Percentage | 37.56 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/017/280/035/GCA_017280035.1_ASM1728003v1 | ||
| CDS | 2693 | ||
| Genes | 2838 | ||
| mRNA | 2838 | ||
| misc RNA | 69 | ||
| rRNA | 12 | ||
| tRNA | 63 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.13 % | ||
| CheckM Completeness | 99.61 % | ||
| CheckM Contamination | 0.05 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1728003v1 |
| GenBank Assembly Accession | GCA_017280035.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_017280035.1 [NCBI] |
| BioSample | SAMN18062968 [NCBI] |
| BioProject | PRJNA352597 [NCBI] |
| Submitter | USP |
| Submission Date | 2021-02-26T08:52:11.290 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1351 |
| Isolation Source | Rectal swab |
| Geo Location | Brazil: Santa Catarina |
