Genome Meta Information: Aggregatibacter sp. HMT-513 W11186 (GCA_018128305.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_018128305.1 | ||
| HOMD Taxon-ID | HMT-513 | ||
| Species Name (in use by HOMD) | Aggregatibacter sp. HMT-513 | ||
| Organism Name (as deposited) | HMT-513 Aggregatibacter sp. HMT-513 W11186 | ||
| Strain or Isolate | W11186 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Aggregatibacter; s__Aggregatibacter segnis_A |
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| Sequencing Technology | PacBio Sequel | ||
| Genome Coverage | 300.0x | ||
| Contigs |
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| Total Sequence Length | 1,939,696 (bp) | ||
| GC Percentage | 42.72 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/128/305/GCA_018128305.1_ASM1812830v1 | ||
| CDS | 1826 | ||
| Genes | 1934 | ||
| mRNA | 1934 | ||
| misc RNA | 31 | ||
| rRNA | 19 | ||
| tRNA | 57 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.89 % | ||
| CheckM Contamination | 0.45 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.09 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1812830v1 |
| GenBank Assembly Accession | GCA_018128305.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_018128305.1 [NCBI] |
| BioSample | SAMN18352203 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2021-03-18T16:33:06.840 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 712150 |
| Isolation Source | human oral cavity |
| Geo Location | United Kingdom: London |
