Genome Meta Information: Bacteroides thetaiotaomicron CL06T03C18 (GCA_018291825.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_018291825.1 | ||
| HOMD Taxon-ID | HMT-970 | ||
| Species Name (in use by HOMD) | Bacteroides thetaiotaomicron | ||
| Organism Name (as deposited) | HMT-970 Bacteroides thetaiotaomicron CL06T03C18 | ||
| Strain or Isolate | CL06T03C18 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides; s__Bacteroides thetaiotaomicron |
||
| Sequencing Technology | PacBio Sequel | ||
| Genome Coverage | 331.0x | ||
| Contigs |
|
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| Total Sequence Length | 5,830,764 (bp) | ||
| GC Percentage | 42.8 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/291/825/GCA_018291825.1_ASM1829182v1 | ||
| CDS | 4416 | ||
| Genes | 4522 | ||
| mRNA | 4522 | ||
| misc RNA | 20 | ||
| rRNA | 15 | ||
| tRNA | 70 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.17 % | ||
| CheckM Completeness | 99.35 % | ||
| CheckM Contamination | 0.08 % | ||
| CheckM2 Completeness | 99.93 % | ||
| CheckM2 Contamination | 0.31 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1829182v1 |
| GenBank Assembly Accession | GCA_018291825.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_018291825.1 [NCBI] |
| BioSample | SAMN16451188 [NCBI] |
| BioProject | PRJNA669351 [NCBI] |
| Submitter | Brigham & Womens Hospital |
| Submission Date | 2020-10-19T11:44:40.503 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 818 |
| Isolation Source | feces |
| Geo Location | USA: Boston |
