Genome Meta Information: Dialister invisus L3_131_000M1_dasL3_131_000M1_concoct_5 (GCA_018364995.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_018364995.1 | ||
| HOMD Taxon-ID | HMT-0118 | ||
| Species Name (in use by HOMD) | Dialister invisus | ||
| Organism Name (as deposited) | HMT-118 Dialister invisus L3_131_000M1_dasL3_131_000M1_concoct_5 | ||
| Strain or Isolate | L3_131_000M1_dasL3_131_000M1_concoct_5 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Dialisteraceae;g__Dialister; s__Dialister invisus |
||
| Sequencing Technology | Illumina NovaSeq 6000 | ||
| Genome Coverage | 7.3268 | ||
| Contigs |
|
||
| Total Sequence Length | 1,673,203 (bp) | ||
| GC Percentage | 45.5 | ||
| MAG | yes | ||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/364/995/GCA_018364995.1_ASM1836499v1 | ||
| CDS | 1576 | ||
| Genes | 1654 | ||
| mRNA | 1654 | ||
| misc RNA | 28 | ||
| rRNA | 0 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.38 % | ||
| CheckM Completeness | 96.3 % | ||
| CheckM Contamination | 0.79 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1836499v1 |
| GenBank Assembly Accession | GCA_018364995.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_018364995.1 [NCBI] |
| BioSample | SAMN17800926 [NCBI] |
| BioProject | PRJNA698986 [NCBI] |
| Submitter | University of California, Berkeley |
| Submission Date | 2021-02-04T18:19:18.603 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAGZKT01 |
| NCBI TaxID | 218538 |
| Isolation Source | maternal feces |
| Geo Location | USA: Pittsburgh, Magee-Womens |
