Genome Meta Information: Veillonella parvula MCC755 (GCA_018783925.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_018783925.1 | ||
| HOMD Taxon-ID | HMT-0161 | ||
| Species Name (in use by HOMD) | Veillonella parvula | ||
| Organism Name (as deposited) | HMT-161 Veillonella parvula MCC755 | ||
| Strain or Isolate | MCC755 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella; s__Veillonella parvula_A |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 292.593 | ||
| Contigs |
|
||
| Total Sequence Length | 2,098,128 (bp) | ||
| GC Percentage | 38.68 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/783/925/GCA_018783925.1_ASM1878392v1 | ||
| CDS | 1869 | ||
| Genes | 1945 | ||
| mRNA | 1945 | ||
| misc RNA | 22 | ||
| rRNA | 6 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.4 % | ||
| CheckM Completeness | 99.7 % | ||
| CheckM Contamination | 0.4 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1878392v1 |
| GenBank Assembly Accession | GCA_018783925.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_018783925.1 [NCBI] |
| BioSample | SAMN12147434 [NCBI] |
| BioProject | PRJNA548918 [NCBI] |
| Submitter | University College Cork |
| Submission Date | 2019-06-27T09:12:27.387 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | WQNK01 |
| NCBI TaxID | 29466 |
| Isolation Source | feces |
| Geo Location | Ireland |
