Genome Meta Information: Corynebacterium aurimucosum UMB8492-1R (GCA_018919245.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_018919245.1 | ||
| HOMD Taxon-ID | HMT-0034 | ||
| Species Name (in use by HOMD) | Corynebacterium aurimucosum | ||
| Organism Name (as deposited) | HMT-034 Corynebacterium aurimucosum clade-034 UMB8492-1R | ||
| Strain or Isolate | UMB8492-1R | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium aurimucosum |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 113 | ||
| Contigs |
|
||
| Total Sequence Length | 2,683,029 (bp) | ||
| GC Percentage | 60.47 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/919/245/GCA_018919245.1_ASM1891924v1 | ||
| CDS | 2504 | ||
| Genes | 2571 | ||
| mRNA | 0 | ||
| misc RNA | 7 | ||
| rRNA | 5 | ||
| tRNA | 54 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.03 % | ||
| CheckM Completeness | 87.67 % | ||
| CheckM Contamination | 2.97 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1891924v1 |
| GenBank Assembly Accession | GCA_018919245.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_018919245.1 [NCBI] |
| BioSample | SAMN19595177 [NCBI] |
| BioProject | PRJNA316969 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2021-06-07T14:43:06.283 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAHLMD01 |
| NCBI TaxID | 169292 |
| Isolation Source | |
| Geo Location | USA: Maywood, IL |
