Genome Meta Information: Staphylococcus haemolyticus A11 (GCA_018986335.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_018986335.1 | ||
| HOMD Taxon-ID | HMT-0120 | ||
| Species Name (in use by HOMD) | Staphylococcus haemolyticus | ||
| Organism Name (as deposited) | HMT-120 Staphylococcus haemolyticus A11 | ||
| Strain or Isolate | A11 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus haemolyticus |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,485,414 (bp) | ||
| GC Percentage | 32.67 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/986/335/GCA_018986335.1_ASM1898633v1 | ||
| CDS | 2437 | ||
| Genes | 2563 | ||
| mRNA | 2563 | ||
| misc RNA | 79 | ||
| rRNA | 4 | ||
| tRNA | 42 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.58 % | ||
| CheckM Completeness | 99.25 % | ||
| CheckM Contamination | 0.08 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1898633v1 |
| GenBank Assembly Accession | GCA_018986335.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_018986335.1 [NCBI] |
| BioSample | SAMN19654353 [NCBI] |
| BioProject | PRJNA724798 [NCBI] |
| Submitter | Madurai Kamaraj University |
| Submission Date | 2021-06-10T07:42:06.270 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAHMHN01 |
| NCBI TaxID | 1283 |
| Isolation Source | |
| Geo Location | India: Gujarat |
