Genome Meta Information: Streptococcus constellatus 11-6117 (GCA_019336935.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_019336935.1 | ||
| HOMD Taxon-ID | HMT-0576 | ||
| Species Name (in use by HOMD) | Streptococcus constellatus | ||
| Organism Name (as deposited) | HMT-576 Streptococcus constellatus 11-6117 | ||
| Strain or Isolate | 11-6117 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus constellatus |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 213 | ||
| Contigs |
|
||
| Total Sequence Length | 1,869,421 (bp) | ||
| GC Percentage | 37.92 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/336/935/GCA_019336935.1_ASM1933693v1 | ||
| CDS | 1805 | ||
| Genes | 1884 | ||
| mRNA | 1884 | ||
| misc RNA | 32 | ||
| rRNA | 3 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.49 % | ||
| CheckM Contamination | 0.02 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1933693v1 |
| GenBank Assembly Accession | GCA_019336935.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_019336935.1 [NCBI] |
| BioSample | SAMN20327117 [NCBI] |
| BioProject | PRJNA748382 [NCBI] |
| Submitter | University of Mississippi Medical Center |
| Submission Date | 2021-07-20T12:28:03.783 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAHWWC01 |
| NCBI TaxID | 76860 |
| Isolation Source | eye |
| Geo Location | USA: Miami, FL |
