Genome Meta Information: Acidovorax ebreus MNS-0 (GCA_019602835.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_019602835.1 | ||
| HOMD Taxon-ID | HMT-209 | ||
| Species Name (in use by HOMD) | Acidovorax ebreus | ||
| Organism Name (as deposited) | HMT-209 Acidovorax ebreus MNS-0 | ||
| Strain or Isolate | MNS-0 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Diaphorobacter; s__Diaphorobacter nitroreducens |
||
| Sequencing Technology | Illumina MiSeq; PacBio | ||
| Genome Coverage | 366.0x | ||
| Contigs |
|
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| Total Sequence Length | 3,997,592 (bp) | ||
| GC Percentage | 66.46 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/602/835/GCA_019602835.1_ASM1960283v1 | ||
| CDS | 3724 | ||
| Genes | 3815 | ||
| mRNA | 3815 | ||
| misc RNA | 28 | ||
| rRNA | 9 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.98 % | ||
| CheckM Contamination | 0.85 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.41 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1960283v1 |
| GenBank Assembly Accession | GCA_019602835.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_019602835.1 [NCBI] |
| BioSample | SAMN20595319 [NCBI] |
| BioProject | PRJNA752432 [NCBI] |
| Submitter | Shanghai Jiaotong University |
| Submission Date | 2021-08-05T22:09:04.990 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 2866628 |
| Isolation Source | waste water |
| Geo Location | China:binzhou |
