Genome Meta Information: Cutibacterium avidum TP-CV4 (GCA_019704095.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_019704095.1 | ||
| HOMD Taxon-ID | HMT-0552 | ||
| Species Name (in use by HOMD) | Cutibacterium avidum | ||
| Organism Name (as deposited) | HMT-552 Cutibacterium avidum TP-CV4 | ||
| Strain or Isolate | TP-CV4 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium; s__Cutibacterium avidum |
||
| Sequencing Technology | DNBSEQ-G400; GridION | ||
| Genome Coverage | 600 | ||
| Contigs |
|
||
| Total Sequence Length | 2,616,193 (bp) | ||
| GC Percentage | 63.49 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/704/095/GCA_019704095.1_ASM1970409v1 | ||
| CDS | 2374 | ||
| Genes | 2461 | ||
| mRNA | 2461 | ||
| misc RNA | 28 | ||
| rRNA | 9 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.38 % | ||
| CheckM Completeness | 89.86 % | ||
| CheckM Contamination | 9.56 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1970409v1 |
| GenBank Assembly Accession | GCA_019704095.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_019704095.1 [NCBI] |
| BioSample | SAMD00260202 [NCBI] |
| BioProject | PRJDB10833 [NCBI] |
| Submitter | Tokyo University of Pharmacy and Life Sciences |
| Submission Date | 2021-06-03T01:00:42.586 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 33010 |
| Isolation Source | |
| Geo Location | Japan |
