Genome Meta Information: Staphylococcus pettenkoferi K49_2 (GCA_019731485.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_019731485.1 | ||
| HOMD Taxon-ID | HMT-0142 | ||
| Species Name (in use by HOMD) | Staphylococcus pettenkoferi | ||
| Organism Name (as deposited) | HMT-142 Staphylococcus pettenkoferi K49_2 | ||
| Strain or Isolate | K49_2 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus pettenkoferi |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,466,980 (bp) | ||
| GC Percentage | 38.73 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/731/485/GCA_019731485.1_ASM1973148v1 | ||
| CDS | 2328 | ||
| Genes | 2423 | ||
| mRNA | 2423 | ||
| misc RNA | 43 | ||
| rRNA | 2 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.25 % | ||
| CheckM Completeness | 97.99 % | ||
| CheckM Contamination | 1.67 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1973148v1 |
| GenBank Assembly Accession | GCA_019731485.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_019731485.1 [NCBI] |
| BioSample | SAMN14389573 [NCBI] |
| BioProject | PRJNA612981 [NCBI] |
| Submitter | Heilongjiang bayi agricultural university |
| Submission Date | 2020-03-17T08:10:46.763 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAASJD01 |
| NCBI TaxID | 170573 |
| Isolation Source | feces |
| Geo Location | China |
