Genome Meta Information: Streptococcus gordonii K19 (GCA_019733955.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_019733955.1 | ||
| HOMD Taxon-ID | HMT-0622 | ||
| Species Name (in use by HOMD) | Streptococcus gordonii | ||
| Organism Name (as deposited) | HMT-622 Streptococcus gordonii K19 | ||
| Strain or Isolate | K19 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus gordonii |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,266,473 (bp) | ||
| GC Percentage | 40.36 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/733/955/GCA_019733955.1_ASM1973395v1 | ||
| CDS | 2195 | ||
| Genes | 2271 | ||
| mRNA | 2271 | ||
| misc RNA | 32 | ||
| rRNA | 3 | ||
| tRNA | 40 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.24 % | ||
| CheckM Completeness | 99.81 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1973395v1 |
| GenBank Assembly Accession | GCA_019733955.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_019733955.1 [NCBI] |
| BioSample | SAMN14389539 [NCBI] |
| BioProject | PRJNA612981 [NCBI] |
| Submitter | Heilongjiang bayi agricultural university |
| Submission Date | 2020-03-17T08:10:45.946 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JAASHV01 |
| NCBI TaxID | 1302 |
| Isolation Source | feces |
| Geo Location | China |
