Genome Meta Information: Enterobacter cancerogenus HAEC1 (GCA_019880465.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_019880465.1 | ||
| HOMD Taxon-ID | HMT-0565 | ||
| Species Name (in use by HOMD) | Enterobacter cancerogenus | ||
| Organism Name (as deposited) | HMT-565 Enterobacter cancerogenus HAEC1 | ||
| Strain or Isolate | HAEC1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter; s__Enterobacter cancerogenus |
||
| Sequencing Technology | Oxford Nanopore | ||
| Genome Coverage | 645.22 | ||
| Contigs |
|
||
| Total Sequence Length | 5,194,378 (bp) | ||
| GC Percentage | 55.01 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/880/465/GCA_019880465.1_ASM1988046v1 | ||
| CDS | 4768 | ||
| Genes | 5019 | ||
| mRNA | 5019 | ||
| misc RNA | 133 | ||
| rRNA | 25 | ||
| tRNA | 92 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.92 % | ||
| CheckM Completeness | 98.89 % | ||
| CheckM Contamination | 2.61 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1988046v1 |
| GenBank Assembly Accession | GCA_019880465.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_019880465.1 [NCBI] |
| BioSample | SAMN16176831 [NCBI] |
| BioProject | PRJNA640255 [NCBI] |
| Submitter | Nanjing Agricultural University |
| Submission Date | 2020-09-15T22:35:04.340 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 69218 |
| Isolation Source | dead larvae |
| Geo Location | China:Nanjing |
