Genome Meta Information: Streptococcus mitis SK142 (GCA_019929505.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_019929505.1 | ||
| HOMD Taxon-ID | HMT-677 | ||
| Species Name (in use by HOMD) | Streptococcus mitis | ||
| Organism Name (as deposited) | HMT-677 Streptococcus mitis SK142 | ||
| Strain or Isolate | SK142 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus mitis |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 154.0x | ||
| Contigs |
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| Total Sequence Length | 1,849,168 (bp) | ||
| GC Percentage | 40.37 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/929/505/GCA_019929505.1_ASM1992950v1 | ||
| CDS | 1718 | ||
| Genes | 1812 | ||
| mRNA | 1812 | ||
| misc RNA | 48 | ||
| rRNA | 5 | ||
| tRNA | 40 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.42 % | ||
| CheckM Contamination | 0.2 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0.01 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes (Beta) |
View in Anvi`o:
Streptococcus__mitis__HMT_677
(Interactive)
View SVG Image |
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| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1992950v1 |
| GenBank Assembly Accession | GCA_019929505.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_019929505.1 [NCBI] |
| BioSample | SAMN20399930 [NCBI] |
| BioProject | PRJNA749742 [NCBI] |
| Submitter | Institute for Genome Sciences, University of Maryland, Baltimore |
| Submission Date | 2021-07-26T13:03:06.270 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAHZPR01 |
| NCBI TaxID | 28037 |
| Isolation Source | oral cavity |
| Geo Location | missing |
