Genome Meta Information: Cutibacterium acnes NBRC 113869 (GCA_020181495.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_020181495.1 | ||
| HOMD Taxon-ID | HMT-0530 | ||
| Species Name (in use by HOMD) | Cutibacterium acnes | ||
| Organism Name (as deposited) | HMT-530 Cutibacterium acnes NBRC 113869 | ||
| Strain or Isolate | NBRC 113869 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium; s__Cutibacterium acnes |
||
| Sequencing Technology | Illumina MiSeq; Oxford Nanopore MinION | ||
| Genome Coverage | 327 | ||
| Contigs |
|
||
| Total Sequence Length | 2,560,907 (bp) | ||
| GC Percentage | 60.02 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/181/495/GCA_020181495.1_ASM2018149v1 | ||
| CDS | 2352 | ||
| Genes | 2433 | ||
| mRNA | 2433 | ||
| misc RNA | 23 | ||
| rRNA | 9 | ||
| tRNA | 47 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | 99.22 % | ||
| CheckM Completeness | 97.59 % | ||
| CheckM Contamination | 0.62 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2018149v1 |
| GenBank Assembly Accession | GCA_020181495.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_020181495.1 [NCBI] |
| BioSample | SAMN21163589 [NCBI] |
| BioProject | PRJNA747117 [NCBI] |
| Submitter | National Institute of Advanced Industrial Science and Technology, Biomedical Research Institute |
| Submission Date | 2021-09-01T00:52:05.090 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1734925 |
| Isolation Source | human skin |
| Geo Location | Japan |
