Genome Meta Information: Streptococcus parasanguinis DFI.4.42 (GCA_020554365.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_020554365.1 | ||
| HOMD Taxon-ID | HMT-0411 | ||
| Species Name (in use by HOMD) | Streptococcus parasanguinis | ||
| Organism Name (as deposited) | HMT-411 Streptococcus parasanguinis DFI.4.42 | ||
| Strain or Isolate | DFI.4.42 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus parasanguinis_S |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,129,120 (bp) | ||
| GC Percentage | 41.8 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/554/365/GCA_020554365.1_ASM2055436v1 | ||
| CDS | 2009 | ||
| Genes | 2092 | ||
| mRNA | 2092 | ||
| misc RNA | 41 | ||
| rRNA | 3 | ||
| tRNA | 38 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.52 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2055436v1 |
| GenBank Assembly Accession | GCA_020554365.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_020554365.1 [NCBI] |
| BioSample | SAMN22167634 [NCBI] |
| BioProject | PRJNA737800 [NCBI] |
| Submitter | University of Chicago |
| Submission Date | 2021-10-08T16:33:11.230 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAJCHF01 |
| NCBI TaxID | 2883234 |
| Isolation Source | fecal sample |
| Geo Location | USA:Chicago |
