Taxon Table | Genome Table
Genome Meta Information:
Eubacterium
limosum
DFI.6.107 (GCA_020559625.1)
| HOMD Genome-ID |
GCA_020559625.1
|
| HOMD Taxon-ID |
HMT-0655
|
| Species Name (in use by HOMD) |
Eubacterium limosum
|
| Organism Name (as deposited) |
HMT-655 Eubacterium limosum DFI.6.107
|
| Strain or Isolate |
DFI.6.107
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Eubacteriales;f__Eubacteriaceae;g__Eubacterium;
s__Eubacterium limosum |
| Sequencing Technology |
Illumina MiSeq
|
| Genome Coverage |
100
|
| Contigs |
Number of Contigs: 107
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
4,743,605 (bp) |
| GC Percentage |
47.01
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/559/625/GCA_020559625.1_ASM2055962v1
|
| CDS |
4564
|
| Genes |
4740
|
| mRNA |
4740
|
| misc RNA |
102
|
| rRNA |
9
|
| tRNA |
64
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
98.28 %
|
| CheckM Completeness |
99.36 %
|
| CheckM Contamination |
0.53 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM2055962v1
|
| GenBank Assembly Accession |
GCA_020559625.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_020559625.1
[NCBI]
|
| BioSample |
SAMN22167486
[NCBI]
|
| BioProject |
PRJNA737800
[NCBI]
|
| Submitter |
University of Chicago
|
| Submission Date |
2021-10-08T16:33:08.636
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JAJCLO01
|
| NCBI TaxID |
1736
|
| Isolation Source |
fecal sample
|
| Geo Location |
USA:Chicago
|
