Genome Meta Information: Granulicatella elegans FDAARGOS_1559 (GCA_020735385.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_020735385.1 | ||
| HOMD Taxon-ID | HMT-0596 | ||
| Species Name (in use by HOMD) | Granulicatella elegans | ||
| Organism Name (as deposited) | HMT-596 Granulicatella elegans FDAARGOS_1559 | ||
| Strain or Isolate | FDAARGOS_1559 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Granulicatella; s__Granulicatella elegans_B |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 3069.25 | ||
| Contigs |
|
||
| Total Sequence Length | 1,890,620 (bp) | ||
| GC Percentage | 33.66 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/735/385/GCA_020735385.1_ASM2073538v1 | ||
| CDS | 1783 | ||
| Genes | 1904 | ||
| mRNA | 1904 | ||
| misc RNA | 46 | ||
| rRNA | 15 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 92.22 % | ||
| CheckM Completeness | 87.28 % | ||
| CheckM Contamination | 5.27 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2073538v1 |
| GenBank Assembly Accession | GCA_020735385.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_020735385.1 [NCBI] |
| BioSample | SAMN22091656 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2021-10-06T15:31:04.900 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 137732 |
| Isolation Source | missing |
| Geo Location | Germany: Braunschweig |
