Genome Meta Information: Ureaplasma parvum MIN-198 (GCA_021460135.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_021460135.1 | ||
| HOMD Taxon-ID | HMT-0799 | ||
| Species Name (in use by HOMD) | Ureaplasma parvum | ||
| Organism Name (as deposited) | HMT-799 Ureaplasma parvum MIN-198 | ||
| Strain or Isolate | MIN-198 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Mycoplasmatales;f__Mycoplasmoidaceae;g__Ureaplasma; s__Ureaplasma parvum |
||
| Sequencing Technology | Illumina MiSeq, Oxford Nanopore MiniION | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 726,862 (bp) | ||
| GC Percentage | 25.46 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/021/460/135/GCA_021460135.1_ASM2146013v1 | ||
| CDS | 1213 | ||
| Genes | 1254 | ||
| mRNA | 1254 | ||
| misc RNA | 4 | ||
| rRNA | 6 | ||
| tRNA | 30 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.48 % | ||
| CheckM Completeness | 98.8 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2146013v1 |
| GenBank Assembly Accession | GCA_021460135.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_021460135.1 [NCBI] |
| BioSample | SAMN22108515 [NCBI] |
| BioProject | PRJNA769286 [NCBI] |
| Submitter | Cardiff University |
| Submission Date | 2021-10-07T09:35:03.717 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 134821 |
| Isolation Source | |
| Geo Location | United Kingdom |
