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Genome Meta Information:
Bacteroides
pyogenes
ET44 (GCA_021532155.1)
| HOMD Genome-ID |
GCA_021532155.1
|
| HOMD Taxon-ID |
HMT-787
|
| Species Name (in use by HOMD) |
Bacteroides pyogenes
|
| Organism Name (as deposited) |
HMT-787 Bacteroides pyogenes ET44
|
| Strain or Isolate |
ET44
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;
s__Bacteroides pyogenes |
| Sequencing Technology |
Illumina NextSeq
|
| Genome Coverage |
74.0x
|
| Contigs |
Number of Contigs: 132
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
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|
|
| Total Sequence Length |
3,309,443 (bp) |
| GC Percentage |
45.78
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/021/532/155/GCA_021532155.1_ASM2153215v1
|
| CDS |
2736
|
| Genes |
2870
|
| mRNA |
2870
|
| misc RNA |
67
|
| rRNA |
5
|
| tRNA |
61
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
98.85 %
|
| CheckM Completeness |
99.25 %
|
| CheckM Contamination |
0.19 %
|
| CheckM2 Completeness |
99.79 %
|
| CheckM2 Contamination |
0 %
|
| CRISPR-cas |
3 Contigs
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM2153215v1
|
| GenBank Assembly Accession |
GCA_021532155.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_021532155.1
[NCBI]
|
| BioSample |
SAMN15872580
[NCBI]
|
| BioProject |
PRJNA658263
[NCBI]
|
| Submitter |
Veterinary Research Institute
|
| Submission Date |
2020-08-21T11:32:06.660
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JADYUW01
|
| NCBI TaxID |
310300
|
| Isolation Source |
|
| Geo Location |
not applicable
|
