Genome Meta Information: Acidovorax temperans SKS3.bin6 (GCA_021849105.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_021849105.1 | ||
| HOMD Taxon-ID | HMT-216 | ||
| Species Name (in use by HOMD) | Acidovorax temperans | ||
| Organism Name (as deposited) | HMT-216 Acidovorax temperans SKS3.bin6 | ||
| Strain or Isolate | SKS3.bin6 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax; s__Acidovorax temperans |
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| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 50.0x | ||
| Contigs |
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| Total Sequence Length | 3,758,010 (bp) | ||
| GC Percentage | 63.59 | ||
| MAG | yes | ||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/021/849/105/GCA_021849105.1_ASM2184910v1 | ||
| CDS | 3380 | ||
| Genes | 3449 | ||
| mRNA | 3449 | ||
| misc RNA | 23 | ||
| rRNA | 1 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 95.39 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 98.72 % | ||
| CheckM2 Contamination | 1.18 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2184910v1 |
| GenBank Assembly Accession | GCA_021849105.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMN20843846 [NCBI] |
| BioProject | PRJNA666025 [NCBI] |
| Submitter | Sun Yat-sen University, Guangzhou |
| Submission Date | 2021-08-18T03:59:08.710 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JAJZTI01 |
| NCBI TaxID | 1977087 |
| Isolation Source | acid mine drainage sediment |
| Geo Location | China: Shuikoushan Lead-Zinc M |
