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Genome Meta Information:
Alloprevotella
tannerae
51-1 (GCA_022014045.1)
| HOMD Genome-ID |
GCA_022014045.1
|
| HOMD Taxon-ID |
HMT-466
|
| Species Name (in use by HOMD) |
Alloprevotella tannerae
|
| Organism Name (as deposited) |
HMT-466 Alloprevotella tannerae 51-1
|
| Strain or Isolate |
51-1
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Alloprevotella;
s__Alloprevotella tannerae |
| Sequencing Technology |
Illumina HiSeq
|
| Genome Coverage |
400.0x
|
| Contigs |
Number of Contigs: 120
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,684,346 (bp) |
| GC Percentage |
46.4
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/014/045/GCA_022014045.1_ASM2201404v1
|
| CDS |
2230
|
| Genes |
2288
|
| mRNA |
2288
|
| misc RNA |
4
|
| rRNA |
3
|
| tRNA |
50
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
96.52 %
|
| CheckM Completeness |
98.5 %
|
| CheckM Contamination |
0 %
|
| CheckM2 Completeness |
99.99 %
|
| CheckM2 Contamination |
0.02 %
|
| CRISPR-cas |
Ambiguous
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM2201404v1
|
| GenBank Assembly Accession |
GCA_022014045.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_022014045.1
[NCBI]
|
| BioSample |
SAMN17221976
[NCBI]
|
| BioProject |
PRJNA689928
[NCBI]
|
| Submitter |
Health Sciences University of Hokkaido
|
| Submission Date |
2021-01-06T00:53:05.980
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JAENXZ01
|
| NCBI TaxID |
76122
|
| Isolation Source |
|
| Geo Location |
Japan
|
