Genome Meta Information: Alloprevotella tannerae 45-2 (GCA_022014115.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_022014115.1 | ||
| HOMD Taxon-ID | HMT-466 | ||
| Species Name (in use by HOMD) | Alloprevotella tannerae | ||
| Organism Name (as deposited) | HMT-466 Alloprevotella tannerae 45-2 | ||
| Strain or Isolate | 45-2 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Alloprevotella; s__Alloprevotella tannerae |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 400.0x | ||
| Contigs |
|
||
| Total Sequence Length | 2,497,228 (bp) | ||
| GC Percentage | 46.65 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/014/115/GCA_022014115.1_ASM2201411v1 | ||
| CDS | 2062 | ||
| Genes | 2126 | ||
| mRNA | 2126 | ||
| misc RNA | 8 | ||
| rRNA | 4 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.78 % | ||
| CheckM Completeness | 98.38 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.97 % | ||
| CheckM2 Contamination | 0.01 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2201411v1 |
| GenBank Assembly Accession | GCA_022014115.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_022014115.1 [NCBI] |
| BioSample | SAMN17221974 [NCBI] |
| BioProject | PRJNA689928 [NCBI] |
| Submitter | Health Sciences University of Hokkaido |
| Submission Date | 2021-01-06T00:53:05.893 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAENYB01 |
| NCBI TaxID | 76122 |
| Isolation Source | |
| Geo Location | Japan |
