Genome Meta Information: Fusobacterium polymorphum Fn3760T (GCA_022340115.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_022340115.1 | ||
| HOMD Taxon-ID | HMT-0202 | ||
| Species Name (in use by HOMD) | Fusobacterium polymorphum | ||
| Organism Name (as deposited) | HMT-202 Fusobacterium polymorphum Fn3760T | ||
| Strain or Isolate | Fn3760T | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium polymorphum |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 114 | ||
| Contigs |
|
||
| Total Sequence Length | 2,299,006 (bp) | ||
| GC Percentage | 26.71 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/340/115/GCA_022340115.1_ASM2234011v1 | ||
| CDS | 2177 | ||
| Genes | 2241 | ||
| mRNA | 2241 | ||
| misc RNA | 26 | ||
| rRNA | 0 | ||
| tRNA | 37 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 92.34 % | ||
| CheckM Completeness | 95.16 % | ||
| CheckM Contamination | 1.58 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2234011v1 |
| GenBank Assembly Accession | GCA_022340115.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_022340115.1 [NCBI] |
| BioSample | SAMN20819808 [NCBI] |
| BioProject | PRJNA755318 [NCBI] |
| Submitter | Resphera Biosciences |
| Submission Date | 2021-08-16T20:19:46.630 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAIMZK01 |
| NCBI TaxID | 851 |
| Isolation Source | tissue |
| Geo Location | missing |
