Genome Meta Information: Corynebacterium afermentans ACRPV (GCA_022346315.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_022346315.1 | ||
| HOMD Taxon-ID | HMT-0030 | ||
| Species Name (in use by HOMD) | Corynebacterium afermentans | ||
| Organism Name (as deposited) | HMT-030 Corynebacterium afermentans ACRPV | ||
| Strain or Isolate | ACRPV | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium afermentans |
||
| Sequencing Technology | Illumina NovaSeq | ||
| Genome Coverage | 82 | ||
| Contigs |
|
||
| Total Sequence Length | 2,406,062 (bp) | ||
| GC Percentage | 64.55 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/346/315/GCA_022346315.1_ASM2234631v1 | ||
| CDS | 2218 | ||
| Genes | 2288 | ||
| mRNA | 2288 | ||
| misc RNA | 8 | ||
| rRNA | 7 | ||
| tRNA | 54 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.5 % | ||
| CheckM Completeness | 97.6 % | ||
| CheckM Contamination | 0.55 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2234631v1 |
| GenBank Assembly Accession | GCA_022346315.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_022346315.1 [NCBI] |
| BioSample | SAMN17729879 [NCBI] |
| BioProject | PRJNA694925 [NCBI] |
| Submitter | NHGRI/NIH |
| Submission Date | 2021-02-01T14:55:15.126 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAKRDC01 |
| NCBI TaxID | 38286 |
| Isolation Source | skin |
| Geo Location | USA |
