Genome Meta Information: Staphylococcus hominis 384 (GCA_022695885.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_022695885.1 | ||
| HOMD Taxon-ID | HMT-0127 | ||
| Species Name (in use by HOMD) | Staphylococcus hominis | ||
| Organism Name (as deposited) | HMT-127 Staphylococcus hominis 384 | ||
| Strain or Isolate | 384 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus hominis |
||
| Sequencing Technology | Oxford Nanopore MinION | ||
| Genome Coverage | 398 | ||
| Contigs |
|
||
| Total Sequence Length | 2,315,909 (bp) | ||
| GC Percentage | 31.57 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/695/885/GCA_022695885.1_ASM2269588v1 | ||
| CDS | 2187 | ||
| Genes | 2351 | ||
| mRNA | 2351 | ||
| misc RNA | 81 | ||
| rRNA | 19 | ||
| tRNA | 63 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.14 % | ||
| CheckM Completeness | 88.94 % | ||
| CheckM Contamination | 3.08 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2269588v1 |
| GenBank Assembly Accession | GCA_022695885.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_022695885.1 [NCBI] |
| BioSample | SAMN26134968 [NCBI] |
| BioProject | PRJNA808897 [NCBI] |
| Submitter | Mahidol University |
| Submission Date | 2022-02-21T10:01:03.733 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAKUUV01 |
| NCBI TaxID | 145391 |
| Isolation Source | skin wound |
| Geo Location | Thailand: Bangkok |
