Genome Meta Information: Staphylococcus haemolyticus 48 (GCA_022695925.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_022695925.1 | ||
| HOMD Taxon-ID | HMT-0120 | ||
| Species Name (in use by HOMD) | Staphylococcus haemolyticus | ||
| Organism Name (as deposited) | HMT-120 Staphylococcus haemolyticus 48 | ||
| Strain or Isolate | 48 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus haemolyticus |
||
| Sequencing Technology | Oxford Nanopore MinION | ||
| Genome Coverage | 210 | ||
| Contigs |
|
||
| Total Sequence Length | 2,611,179 (bp) | ||
| GC Percentage | 32.7 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/695/925/GCA_022695925.1_ASM2269592v1 | ||
| CDS | 2487 | ||
| Genes | 2668 | ||
| mRNA | 2668 | ||
| misc RNA | 98 | ||
| rRNA | 19 | ||
| tRNA | 63 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.36 % | ||
| CheckM Completeness | 99.06 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2269592v1 |
| GenBank Assembly Accession | GCA_022695925.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_022695925.1 [NCBI] |
| BioSample | SAMN26134967 [NCBI] |
| BioProject | PRJNA808897 [NCBI] |
| Submitter | Mahidol University |
| Submission Date | 2022-02-21T10:01:03.720 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAKUUW01 |
| NCBI TaxID | 1283 |
| Isolation Source | skin wound |
| Geo Location | Thailand: Bangkok |
