Genome Meta Information: Acidovorax ebreus Cit_metabat.bin.1 (GCA_022729045.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_022729045.1 | ||
| HOMD Taxon-ID | HMT-209 | ||
| Species Name (in use by HOMD) | Acidovorax ebreus | ||
| Organism Name (as deposited) | HMT-209 Acidovorax ebreus Cit_metabat.bin.1 | ||
| Strain or Isolate | Cit_metabat.bin.1 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Diaphorobacter; s__Diaphorobacter nitroreducens |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 358.1x | ||
| Contigs |
|
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| Total Sequence Length | 3,782,621 (bp) | ||
| GC Percentage | 66.88 | ||
| MAG | yes | ||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/729/045/GCA_022729045.1_ASM2272904v1 | ||
| CDS | 3501 | ||
| Genes | 3660 | ||
| mRNA | 3660 | ||
| misc RNA | 109 | ||
| rRNA | 1 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.9 % | ||
| CheckM Contamination | 0.57 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0.06 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2272904v1 |
| GenBank Assembly Accession | GCA_022729045.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_022729045.1 [NCBI] |
| BioSample | SAMN26806355 [NCBI] |
| BioProject | PRJNA817706 [NCBI] |
| Submitter | Colledge of Environmental Sciences and Engineering, Peking University |
| Submission Date | 2022-03-19T05:04:04.540 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JALDWU01 |
| NCBI TaxID | 1934310 |
| Isolation Source | freshwater lake anaerobic enchiment culture with carbon source citrate |
| Geo Location | China:Beijing |
