Genome Meta Information: Faecalibacterium prausnitzii BCRC 81148 (GCA_022750565.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_022750565.1 | ||
| HOMD Taxon-ID | HMT-0961 | ||
| Species Name (in use by HOMD) | Faecalibacterium prausnitzii | ||
| Organism Name (as deposited) | HMT-961 Faecalibacterium prausnitzii BCRC 81148 | ||
| Strain or Isolate | BCRC 81148 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium; s__Faecalibacterium prausnitzii |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 448 | ||
| Contigs |
|
||
| Total Sequence Length | 3,243,905 (bp) | ||
| GC Percentage | 55.88 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/750/565/GCA_022750565.1_ASM2275056v1 | ||
| CDS | 3057 | ||
| Genes | 3182 | ||
| mRNA | 3182 | ||
| misc RNA | 53 | ||
| rRNA | 9 | ||
| tRNA | 62 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.56 % | ||
| CheckM Completeness | 96.49 % | ||
| CheckM Contamination | 7.45 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2275056v1 |
| GenBank Assembly Accession | GCA_022750565.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_022750565.1 [NCBI] |
| BioSample | SAMN09842204 [NCBI] |
| BioProject | PRJNA486247 [NCBI] |
| Submitter | Food Industry Research and Development Institute |
| Submission Date | 2018-08-16T04:09:02.850 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | QVIH01 |
| NCBI TaxID | 853 |
| Isolation Source | feces |
| Geo Location | Taiwan |
