Taxon Table | Genome Table
Genome Meta Information:
Fusobacterium
necrophorum
SUG1073 (GCA_022787675.1)
| HOMD Genome-ID |
GCA_022787675.1
|
| HOMD Taxon-ID |
HMT-0690
|
| Species Name (in use by HOMD) |
Fusobacterium necrophorum
|
| Organism Name (as deposited) |
HMT-690 Fusobacterium necrophorum SUG1073
|
| Strain or Isolate |
SUG1073
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium_C;
s__Fusobacterium_C necrophorum |
| Sequencing Technology |
Illumina NovaSeq
|
| Genome Coverage |
6.37418
|
| Contigs |
Number of Contigs: 180
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
1,677,681 (bp) |
| GC Percentage |
35.41
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/787/675/GCA_022787675.1_ASM2278767v1
|
| CDS |
1516
|
| Genes |
1555
|
| mRNA |
1555
|
| misc RNA |
17
|
| rRNA |
1
|
| tRNA |
21
|
| tmRNA |
0
|
| ANI (Average Nucluotide Identity) |
97.2 %
|
| CheckM Completeness |
78.79 %
|
| CheckM Contamination |
0.6 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
Ambiguous
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM2278767v1
|
| GenBank Assembly Accession |
GCA_022787675.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
[NCBI]
|
| BioSample |
SAMN26927399
[NCBI]
|
| BioProject |
PRJNA629856
[NCBI]
|
| Submitter |
AAFC
|
| Submission Date |
2022-03-24T12:34:07.066
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JALFWK01
|
| NCBI TaxID |
859
|
| Isolation Source |
feces
|
| Geo Location |
Canada:Lacombe
|
