Genome Meta Information: Roseomonas gilardii ATCC 49956 (GCA_023078375.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_023078375.1 | ||
| HOMD Taxon-ID | HMT-0244 | ||
| Species Name (in use by HOMD) | Roseomonas gilardii | ||
| Organism Name (as deposited) | HMT-244 Roseomonas gilardii ATCC 49956 | ||
| Strain or Isolate | ATCC 49956 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Roseomonas; s__Roseomonas gilardii |
||
| Sequencing Technology | Oxford Nanopore MinION | ||
| Genome Coverage | 86.6 | ||
| Contigs |
|
||
| Total Sequence Length | 4,624,884 (bp) | ||
| GC Percentage | 70.31 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/078/375/GCA_023078375.1_ASM2307837v1 | ||
| CDS | 4246 | ||
| Genes | 4348 | ||
| mRNA | 4348 | ||
| misc RNA | 22 | ||
| rRNA | 15 | ||
| tRNA | 64 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 91.94 % | ||
| CheckM Completeness | 88.43 % | ||
| CheckM Contamination | 3.56 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2307837v1 |
| GenBank Assembly Accession | GCA_023078375.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_023078375.1 [NCBI] |
| BioSample | SAMN27409697 [NCBI] |
| BioProject | PRJNA824703 [NCBI] |
| Submitter | Changwon National University |
| Submission Date | 2022-04-08T02:37:06.966 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 204527 |
| Isolation Source | blood and other clinical sources |
| Geo Location | USA |
